Paper List of de novo sequencing

List of De novo sequencing Paper:

[1997]
Taylor, J. A. and R. S. Johnson (1997). "Sequence database searches via de novo peptide sequencing by tandem mass spectrometry." Rapid Commun Mass Spectrom 11(9): 1067-75.

[1998]
Fernandez-de-Cossio, J., J. Gonzalez, et al. (1998). "Automated interpretation of high-energy collision-induced dissociation spectra of singly protonated peptides by 'SeqMS', a software aid for de novo sequencing by tandem mass spectrometry." Rapid Commun Mass Spectrom 12(23): 1867-78.

[1999]
Dancik, V., T. A. Addona, et al. (1999). "De novo peptide sequencing via tandem mass spectrometry." J Comput Biol 6(3-4): 327-42.

[2000]
Fernandez-de-Cossio, J., J. Gonzalez, et al. (2000). "Automated interpretation of low-energy collision-induced dissociation spectra by SeqMS, a software aid for de novo sequencing by tandem mass spectrometry." Electrophoresis 21(9): 1694-9.

[2001]
Chen, T., M. Y. Kao, et al. (2001). "A dynamic programming approach to de novo peptide sequencing via tandem mass spectrometry." J Comput Biol 8(3): 325-37.

Taylor, J. A. and R. S. Johnson (2001). "Implementation and uses of automated de novo peptide sequencing by tandem mass spectrometry." Anal Chem 73(11): 2594-604.

[2002]
Olaf Lubeck, Christopher Sewell, Sheng Gu, Xian Chen, and D. Michael Cai, Proc. IEEE 90(12):1868–1874, Dec 2002

[2003]
Tabb, D. L., A. Saraf, et al. (2003). "GutenTag: high-throughput sequence tagging via an empirically derived fragmentation model." Anal Chem 75(23): 6415-21.

Lu, B. and T. Chen (2003). "A suboptimal algorithm for de novo peptide sequencing via tandem mass spectrometry." J Comput Biol 10(1): 1-12.

Ma, B., K. Zhang, et al. (2003). "PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry." Rapid Commun Mass Spectrom 17(20): 2337-42.

Bafna and Edwards (2003) "On de novo interpretation of tandem mass spectra for peptide identification" [RECOMB]

[2004]
Heredia-Langner, A., W. R. Cannon, et al. (2004). "Sequence optimization as an alternative to de novo analysis of tandem mass spectrometry data." Bioinformatics 20(14): 2296-2304.

Frank, A. and P. Pevzner (2005). "PepNovo: De novo peptide sequencing via probabilistic network modeling." Analytical Chemistry 77(4): 964-973.